Title
ViTraM : visualization of transcriptional modules ViTraM : visualization of transcriptional modules
Author
Faculty/Department
Faculty of Sciences. Mathematics and Computer Science
Publication type
article
Publication
Oxford ,
Subject
Biology
Engineering sciences. Technology
Computer. Automation
Source (journal)
Bioinformatics. - Oxford
Volume/pages
25(2009) :18 , p. 2450-2451
ISSN
1367-4803
ISI
000269607700030
Carrier
E
Target language
English (eng)
Full text (Publishers DOI)
Abstract
Motivation: We developed ViTraM, a tool that allows visualizing overlapping transcriptional modules in an intuitive way. By visualizing not only the genes and the experiments in which the genes are co-expressed, but also additional properties of the modules such as the regulators and regulatory motifs that are responsible for the observed co-expression, ViTraM can assist in the biological analysis and interpretation of the output of module detection tools.
E-info
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